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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1069KEGG: mfa:Mfla_1350 hypothetical protein. (322 aa)    
Predicted Functional Partners:
Mmol_1070
KEGG: mfa:Mfla_1350 hypothetical protein.
      
0.584
Mmol_1071
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1343 general secretion pathway protein G.
       0.583
Mmol_1072
PFAM: type II secretion system protein; KEGG: mfa:Mfla_1342 type II secretion system protein.
       0.575
Mmol_1073
PFAM: type II secretion system protein E; KEGG: mfa:Mfla_1341 type II secretion system protein E.
       0.575
Mmol_1074
KEGG: mfa:Mfla_1340 hypothetical protein.
       0.575
Mmol_1075
KEGG: mfa:Mfla_1339 hypothetical protein.
       0.575
Mmol_1076
KEGG: mfa:Mfla_1338 putative transmembrane protein.
       0.575
Mmol_1077
KEGG: mfa:Mfla_1337 hypothetical protein.
       0.575
Mmol_1068
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1351 TonB-dependent receptor.
       0.464
Mmol_1078
PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mfa:Mfla_1336 type II and III secretion system protein; Belongs to the bacterial secretin family.
       0.460
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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