Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mmol_1102KEGG: mfa:Mfla_0692 von Willebrand factor, type A. (323 aa)    
Predicted Functional Partners:
Mmol_1105
KEGG: mfa:Mfla_0689 MxaA protein, putative.
 
  
  0.994
Mmol_1103
KEGG: mfa:Mfla_0691 hypothetical protein.
    
  0.977
Mmol_1544
SMART: von Willebrand factor type A; KEGG: mfa:Mfla_1898 von Willebrand factor, type A.
 
  
  0.977
Mmol_2045
PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I.
  
  
  0.976
Mmol_2046
PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I.
  
  
  0.976
Mmol_2047
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mfa:Mfla_2313 extracellular solute-binding protein.
 
  
  0.970
Mmol_2048
KEGG: mfa:Mfla_2314 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone.
  
  
  0.954
Mmol_1770
KEGG: mfa:Mfla_0344 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone.
  
  
  0.950
Mmol_1104
SMART: von Willebrand factor type A; KEGG: mfa:Mfla_0690 von Willebrand factor, type A.
 
     0.947
Mmol_1106
KEGG: mfa:Mfla_0688 hypothetical protein.
 
    0.943
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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