Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mmol_1124PFAM: protein of unknown function DUF59; KEGG: reh:H16_B1517 iron sulfur cluster assembly protein (SufT). (119 aa)    
Predicted Functional Partners:
Mmol_1128
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: tmz:Tmz1t_1898 FeS assembly ATPase SufC.
 
  
 0.926
Mmol_1125
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: reh:H16_B1516 iron sulfur cluster assembly protein (SufU).
 
    0.908
Mmol_1127
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: pol:Bpro_4271 FeS assembly protein SufD.
 
   
 0.904
Mmol_1129
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: pol:Bpro_4269 cysteine desulfurase activator complex subunit SufB.
 
   
 0.902
Mmol_1126
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.854
Mmol_1123
PFAM: Rieske [2Fe-2S] domain protein; KEGG: reh:H16_B1518 ferredoxin containing [2Fe-2S] Rieske domain (SufR).
       0.705
Mmol_1674
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
    0.589
Mmol_1122
PFAM: protein of unknown function DUF1282; KEGG: azo:azo1485 hypothetical protein.
 
     0.441
Mmol_0752
PFAM: MaoC domain protein dehydratase; KEGG: abu:Abu_1926 MaoC family protein.
  
  
 0.430
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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