STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1200KEGG: tbd:Tbd_0758 hypothetical protein. (156 aa)    
Predicted Functional Partners:
Mmol_1199
KEGG: dar:Daro_0886 general secretion pathway protein H.
 
     0.951
Mmol_1202
KEGG: lch:Lcho_3101 hypothetical protein.
 
     0.928
Mmol_1197
KEGG: tbd:Tbd_0755 general secretion pathway protein H.
 
     0.921
Mmol_1198
KEGG: tbd:Tbd_0756 hypothetical protein.
 
     0.921
Mmol_1203
KEGG: har:HEAR1943 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshI.
 
   
 0.878
Mmol_1204
KEGG: har:HEAR1942 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV); putative signal peptide.
 
   
 0.878
Mmol_1205
KEGG: har:HEAR1941 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV); putative signal peptide.
 
     0.874
Mmol_1195
KEGG: dar:Daro_0882 general secretion pathway protein H.
 
     0.837
Mmol_1207
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: har:HEAR1939 mannose-sensitive hemagglutinin L.
 
     0.832
Mmol_1196
KEGG: har:HEAR1950 mannose-sensitive hemagglutinin a (partial).
 
     0.743
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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