STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1566KEGG: mfa:Mfla_0546 hypothetical protein. (270 aa)    
Predicted Functional Partners:
Mmol_2198
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0134 TonB-dependent receptor.
  
     0.595
Mmol_0108
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1547 TonB-dependent receptor.
  
     0.534
Mmol_1567
PFAM: cytochrome c class I; KEGG: dar:Daro_0692 cytochrome c, class I.
       0.520
Mmol_1820
PFAM: Na+/solute symporter; KEGG: mfa:Mfla_0695 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.469
Mmol_1493
KEGG: mfa:Mfla_0789 hypothetical protein.
  
     0.428
ycgR
YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
    0.412
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.