Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mmol_1663PFAM: Fusaric acid resistance protein conserved region; KEGG: mfa:Mfla_2583 fusaric acid resistance protein region. (722 aa)    
Predicted Functional Partners:
Mmol_1661
PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_2585 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.954
Mmol_1664
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_2582 RND efflux system, outer membrane lipoprotein, NodT.
 
     0.885
Mmol_1662
PFAM: protein of unknown function DUF1656; KEGG: abo:ABO_0016 hypothetical protein.
     
 0.826
Mmol_1125
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: reh:H16_B1516 iron sulfur cluster assembly protein (SufU).
   
    0.720
Mmol_1674
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.720
Mmol_1665
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2581 MarR family transcriptional regulator.
 
   
 0.684
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.431
Mmol_0105
KEGG: bcm:Bcenmc03_3990 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein.
  
     0.421
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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