STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1802PFAM: VanZ family protein; KEGG: mfa:Mfla_2623 VanZ like protein. (122 aa)    
Predicted Functional Partners:
Mmol_1801
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: nmu:Nmul_A0239 sugar transferase.
       0.814
Mmol_1800
KEGG: mfa:Mfla_1927 LuxR family transcriptional regulator; TIGRFAM: transcriptional regulator EpsA; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
       0.773
Mmol_1803
PFAM: protein of unknown function DUF1555; KEGG: sde:Sde_2041 response regulator receiver domain-containing protein.
       0.517
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.