Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mmol_1908PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dar:Daro_1684 TonB-dependent receptor. (707 aa)    
Predicted Functional Partners:
Mmol_1965
KEGG: pap:PSPA7_1836 hypothetical protein.
  
  
 0.551
Mmol_0538
KEGG: rso:RS05315 putative signal peptide protein.
 
     0.457
Mmol_1068
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1351 TonB-dependent receptor.
  
  
 0.450
Mmol_2127
KEGG: mfa:Mfla_0622 hypothetical protein.
  
     0.450
Mmol_1967
KEGG: dar:Daro_3154 hypothetical protein.
  
     0.445
Mmol_0042
KEGG: mca:MCA3098 hypothetical protein.
  
     0.411
Mmol_0238
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pna:Pnap_3599 TonB-dependent receptor.
  
     0.405
Mmol_0102
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
   0.402
Mmol_2039
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_2306 TonB-like protein.
   
   0.402
Mmol_2080
TIGRFAM: protein TolA; KEGG: mfa:Mfla_2340 hypothetical protein.
   
   0.402
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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