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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1908PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dar:Daro_1684 TonB-dependent receptor. (707 aa)    
Predicted Functional Partners:
Mmol_0783
PFAM: von Willebrand factor type A; Hemolysin-type calcium-binding region; SMART: von Willebrand factor type A; KEGG: sse:Ssed_2342 putative outer membrane adhesin like proteiin.
    
 
 0.554
Mmol_1965
KEGG: pap:PSPA7_1836 hypothetical protein.
  
  
 0.552
Mmol_0102
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
   0.506
Mmol_2039
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_2306 TonB-like protein.
   
   0.506
Mmol_2080
TIGRFAM: protein TolA; KEGG: mfa:Mfla_2340 hypothetical protein.
   
   0.506
Mmol_2108
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
   0.506
Mmol_2284
TIGRFAM: TonB family protein; KEGG: mfa:Mfla_2507 TonB-like protein.
   
   0.506
Mmol_0537
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: har:HEAR0058 putative TonB-dependent receptor protein.
  
  
 0.464
Mmol_0538
KEGG: rso:RS05315 putative signal peptide protein.
 
     0.456
Mmol_2127
KEGG: mfa:Mfla_0622 hypothetical protein.
  
   
 0.452
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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