Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mmol_1981PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mfa:Mfla_1214 oxidoreductase-like protein. (355 aa)    
Predicted Functional Partners:
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mfa:Mfla_0797 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.797
Mmol_1329
KEGG: mfa:Mfla_1631 hypothetical protein.
  
     0.531
Mmol_1276
PFAM: Propeptide PepSY amd peptidase M4; KEGG: mfa:Mfla_1052 peptidase.
  
     0.462
Mmol_1338
PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mfa:Mfla_1654 orotidine 5'-phosphate decarboxylase.
  
    0.454
Mmol_1980
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
    0.451
Mmol_1337
TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_1653 hexulose-6-phosphate isomerase.
 
    0.449
Mmol_0491
PFAM: PfkB domain protein; KEGG: mfa:Mfla_0471 PfkB.
  
  
 0.439
Mmol_0313
PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mfa:Mfla_0250 hexulose-6-phosphate synthase.
  
    0.438
Mmol_1726
KEGG: mfa:Mfla_0760 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
 
  
 0.402
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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