STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_0539KEGG: phe:Phep_1310 hypothetical protein. (681 aa)    
Predicted Functional Partners:
Caka_0978
Glycoside hydrolase family 43; KEGG: pat:Patl_0810 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; SMART: cellulose binding type IV.
  
   
 0.763
Caka_0755
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: xac:XAC1308 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.699
Caka_0227
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: gfo:GFO_1719 glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family.
  
     0.668
Caka_0558
Alpha-L-fucosidase; KEGG: dfe:Dfer_1256 hypothetical protein; PFAM: glycoside hydrolase family 65 central catalytic.
  
     0.658
Caka_0898
PFAM: glycosyl hydrolase family 88; KEGG: bth:BT_2963 hypothetical protein.
  
     0.622
Caka_0609
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: gfo:GFO_1719 glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family.
  
     0.611
Caka_0368
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: gfo:GFO_1719 glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family.
  
     0.604
Caka_0141
PFAM: protein of unknown function DUF1593; KEGG: sde:Sde_0182 hypothetical protein.
  
 
   0.594
Caka_0811
PFAM: glycosyl hydrolase family 88; KEGG: vfi:VF_A0996 hypothetical protein.
  
     0.564
Caka_0538
Hypothetical protein; KEGG: ote:Oter_4535 carbohydrate-binding family 6 protein.
 
     0.546
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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