STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_1726PFAM: glycosyl transferase family 39; KEGG: min:Minf_0934 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family. (557 aa)    
Predicted Functional Partners:
Caka_1724
PFAM: glycosyl transferase family 2; KEGG: avi:Avi_1778 dolichol-phosphate mannosyltransferase.
 
    0.897
Caka_1728
KEGG: dal:Dalk_2668 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
 
     0.835
Caka_1723
4-amino-4-deoxy-L-arabinose transferase-like protein glycosyltransferase of PMT family; KEGG: tgr:Tgr7_3096 glycosyl transferase family 39.
 
     0.818
Caka_1725
PFAM: lipid A biosynthesis domain protein; KEGG: smt:Smal_3961 lipid A biosynthesis domain protein.
 
     0.816
Caka_1727
Phosphoesterase PA-phosphatase related protein; KEGG: min:Minf_1207 membrane-associated phospholipid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
  
    0.793
Caka_2301
PFAM: glycosyl transferase family 2; KEGG: ter:Tery_1340 glycosyl transferase family protein.
    0.754
Caka_2552
PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_0086 glycosyl transferase family 2.
 
    0.649
Caka_1390
PFAM: protein of unknown function DUF1009; KEGG: ote:Oter_3873 hypothetical protein.
  
     0.462
Caka_2996
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
     0.448
Caka_2538
PFAM: lipid A biosynthesis acyltransferase; KEGG: amu:Amuc_1541 lipid A biosynthesis acyltransferase.
 
   
 0.429
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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