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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ProteinProtein; KEGG: predicted protein; K12447 UDP-sugar pyrophosphorylase. (594 aa)    
Predicted Functional Partners:
Caka_1909
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ote:Oter_3746 phosphoglucomutase/phosphomannomutase alpha/beta/subunit.
  
 0.950
Caka_0701
Galactokinase; KEGG: ote:Oter_0502 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.915
Caka_1849
KEGG: ote:Oter_3289 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.912
Caka_1567
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ote:Oter_2734 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.908
Caka_1815
KEGG: rba:RB9094 UTP--glucose-1-phosphate uridylyltransferase.
    
  0.904
Caka_1098
PFAM: NAD-dependent epimerase/dehydratase; KEGG: fsu:Fisuc_2256 NAD-dependent epimerase/dehydratase.
     
 0.900
Caka_1997
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2482 NAD-dependent epimerase/dehydratase.
     
 0.900
Caka_2300
PFAM: NAD-dependent epimerase/dehydratase; KEGG: mhu:Mhun_3084 NAD-dependent epimerase/dehydratase.
     
 0.900
Caka_1053
KEGG: ote:Oter_2108 putative UDP-N- acetylglucosamine diphosphorylase.
     
  0.800
Caka_1838
KEGG: hypothetical protein.
  
     0.696
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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