STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_2843KEGG: gem:GM21_2137 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; PFAM: Dinitrogenase reductase ADP- ribosyltransferase. (267 aa)    
Predicted Functional Partners:
Caka_2844
PFAM: ADP-ribosylation/Crystallin J1; KEGG: abm:ABSDF0852 putative ADP- ribosylglycohydrolase.
 
     0.877
Caka_2606
Arsenate reductase-related protein; PFAM: arsenate reductase and related; KEGG: avn:Avin_51030 nitrogenase-associated protein; Belongs to the ArsC family.
 
     0.718
Caka_1495
PFAM: CHAD domain containing protein; KEGG: ttu:TERTU_3714 putative CHAD domain containing protein.
  
     0.482
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
    0.412
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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