STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_3051PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ote:Oter_1928 6-phosphogluconate dehydrogenase NAD-binding. (276 aa)    
Predicted Functional Partners:
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
  0.811
Caka_0799
PFAM: carboxyl transferase; KEGG: ote:Oter_3307 propionyl-CoA carboxylase.
  
 
  0.803
Caka_1049
PFAM: phosphate acetyl/butaryl transferase; KEGG: cbt:CLH_1185 phosphotransacetylase.
     
  0.800
Caka_1050
PFAM: DRTGG domain protein; KEGG: gur:Gura_4028 phosphotransacetylase domain- containing protein.
     
  0.800
Caka_1429
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
  0.800
Caka_2091
TIGRFAM: formate acetyltransferase; KEGG: cdf:CD0759 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical.
     
  0.800
Caka_0441
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ote:Oter_1134 6-phosphogluconate dehydrogenase NAD-binding.
  
     0.775
Caka_3052
KEGG: pca:Pcar_2289 hypothetical protein.
       0.538
Caka_2038
PFAM: alpha/beta hydrolase fold; KEGG: ote:Oter_3762 alpha/beta hydrolase fold.
      0.470
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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