STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl37eLSU ribosomal protein L37E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (61 aa)    
Predicted Functional Partners:
rpl29
LSU ribosomal protein L29P; InterPro IPR001854; KEGG: dka:DKAM_1168 50S ribosomal protein L29P; PFAM: ribosomal protein L29; SPTR: B8D5W3 50S ribosomal protein L29P; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
 0.972
rpl30e
COGs: COG1911 Ribosomal protein L30E; InterPro IPR004038:IPR000231; KEGG: smr:Smar_0805 50S ribosomal protein L30E; PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; SPTR: A3DMP6 LSU ribosomal protein L30E; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; Belongs to the eukaryotic ribosomal protein eL30 family.
  
 0.968
rpl22
LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
 0.966
rpl31e
50S ribosomal protein L31e; InterPro IPR000054; KEGG: hbu:Hbut_1598 50S ribosomal protein L31e; SPTR: A2BN56 50S ribosomal protein L31e; PFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family.
   
 0.961
rpl24
LSU ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit.
  
 0.957
Igag_0127
COGs: COG0089 Ribosomal protein L23; InterPro IPR013025:IPR001014; KEGG: tne:Tneu_0815 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: B1YD90 50S ribosomal protein L23; PFAM: Ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
  
 0.956
rpl32e
COGs: COG1717 Ribosomal protein L32E; InterPro IPR001515:IPR018263; KEGG: iho:Igni_1279 50S ribosomal protein L32e; PFAM: Ribosomal protein L32e; SPTR: A8AC03 LSU ribosomal protein L32E; PFAM: Ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.
 
 0.950
rps24e
COGs: COG2004 Ribosomal protein S24E; InterPro IPR001976; KEGG: tpe:Tpen_0448 ribosomal protein S24e; SPTR: A1RXC7 SSU ribosomal protein S24E; PFAM: Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.950
rpl34e
COGs: COG2174 Ribosomal protein L34E; InterPro IPR008195:IPR018065; KEGG: hbu:Hbut_1326 50S ribosomal protein L34e; PFAM: Ribosomal protein L34e; SPTR: B7R335 Ribosomal protein L34e; PFAM: Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.
 
 0.948
rpl14e
COGs: COG2163 Ribosomal protein L14E/L6E/L27E; KEGG: smr:Smar_1046 50S ribosomal protein L14E; SPTR: A3DND4 50S ribosomal protein L14e; Belongs to the eukaryotic ribosomal protein eL14 family.
 
 0.947
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.