STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_0763ABC transporter related; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: tko:TK2161 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q5JHJ6 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (267 aa)    
Predicted Functional Partners:
Igag_0764
KEGG: hypothetical protein LOC769970.
       0.773
Igag_1657
ABC transporter related; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: smr:Smar_0390 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3DLJ2 ABC transporter related; PFAM: ABC transporter.
  
    0.711
Igag_0489
KEGG: smr:Smar_0113 hypothetical protein; SPTR: A3DKR6 Putative uncharacterized protein.
  
 
 0.702
Igag_0527
ABC transporter related; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: smr:Smar_0169 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3DKX2 ABC transporter related; PFAM: ABC transporter.
 
    
0.631
rpl2
LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 
   0.583
rpl14
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.557
Igag_0965
ABC transporter related; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593; KEGG: tpe:Tpen_1490 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A1S0A7 ABC transporter related; PFAM: ABC transporter.
 
     0.505
Igag_1018
InterPro IPR002379; KEGG: smr:Smar_1175 H+-transporting two-sector ATPase, C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: A3DNR0 H+-transporting two-sector ATPase, C subunit; PFAM: ATP synthase subunit C.
 
 
   0.487
rpl5
LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
 
     0.471
rpl11
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
 
     0.467
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.