STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_0882Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: dka:DKAM_1435 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: periplasmic binding protein; SPTR: B8D6N0 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein. (388 aa)    
Predicted Functional Partners:
Igag_0880
ABC transporter related; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: tpe:Tpen_1426 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A1S043 ABC transporter related; PFAM: ABC transporter.
 
 
 0.974
Igag_0881
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: tne:Tneu_0389 transport system permease protein; PFAM: transport system permease protein; SPTR: B1YBV3 Transport system permease protein; PFAM: FecCD transport family.
 
 
 0.974
Igag_0883
COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: dka:DKAM_1436 formylmethanofuran dehydrogenase, subunit E - like protein; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: B8D6N1 Formylmethanofuran dehydrogenase, subunit E-like protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
 
    0.925
Igag_0602
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: pfu:PF0910 iron (III) ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: Q8U2C9 Iron (III) ABC transporter, permease protein; PFAM: FecCD transport family.
 
 
 0.875
Igag_0603
ABC transporter related; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: dau:Daud_1214 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B1I3T9 ABC transporter related; PFAM: ABC transporter.
 
 
 0.862
Igag_0884
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: tpe:Tpen_0097 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A1RWC7 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).
       0.546
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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