STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_0887Transcriptional regulator, ArsR family; InterPro IPR001845:IPR013196; KEGG: cma:Cmaq_0138 regulatory protein ArsR; PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein ArsR; SPTR: A8MA56 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family. (204 aa)    
Predicted Functional Partners:
Igag_0886
Protein of unknown function DUF437; COGs: COG2411 conserved hypothetical protein; InterPro IPR007374; KEGG: tko:TK0056 hypothetical protein; PFAM: protein of unknown function DUF437; SPTR: Q5JEG9 Putative uncharacterized protein; PFAM: ASCH domain.
       0.718
Igag_0888
TatD-related deoxyribonuclease; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130; KEGG: hbu:Hbut_1244 DNase; PFAM: TatD-related deoxyribonuclease; SPTR: A2BM65 Predicted DNase; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
       0.666
Igag_0889
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197; KEGG: cma:Cmaq_0539 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8MC77 Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.664
Igag_0890
ABC transporter related; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: hbu:Hbut_0333 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A2BJP4 Predicted ABC transporter; PFAM: ABC transporter.
       0.422
Igag_0891
Binding-protein-dependent transport systems inner membrane component; COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: hbu:Hbut_0334 ABC-type tungstate transport system, periplasmic component, TupA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A2BJP5 ABC-type tungstate transport system, periplasmic component, TupA; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.422
Igag_0892
COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: hbu:Hbut_0335 ABC-type tungstate transport system, permease component, TupB; SPTR: A2BJP6 ABC-type tungstate transport system, permease component, TupB.
       0.422
Igag_0885
Glycoside hydrolase family 12; InterPro IPR002594; KEGG: sso:SSO1354 endoglucanase precursor; PFAM: glycoside hydrolase family 12; SPTR: Q97YG7 Endoglucanase; PFAM: Glycosyl hydrolase family 12.
       0.417
Igag_0893
KEGG: cma:Cmaq_1569 hypothetical protein; SPTR: A8M9H3 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
       0.412
Igag_0448
Thiolase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: hbu:Hbut_1528 acetyl-CoA acetyltransferase; PFAM: Thiolase; SPTR: A2BMY9 Acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain.
  
  
 0.409
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.