Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Igag_0984 | Igag_0985 | Hypothetical protein. | COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: sim:M1627_2663 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: C3N303 Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD). | 0.513 |
Igag_0984 | Igag_0986 | Hypothetical protein. | Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: smr:Smar_0128 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: A3DKT1 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.403 |
Igag_0985 | Igag_0984 | COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: sim:M1627_2663 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: C3N303 Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD). | Hypothetical protein. | 0.513 |
Igag_0985 | Igag_0986 | COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: sim:M1627_2663 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: C3N303 Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD). | Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: smr:Smar_0128 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: A3DKT1 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.588 |
Igag_0986 | Igag_0984 | Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: smr:Smar_0128 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: A3DKT1 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | Hypothetical protein. | 0.403 |
Igag_0986 | Igag_0985 | Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: smr:Smar_0128 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: A3DKT1 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: sim:M1627_2663 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: C3N303 Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD). | 0.588 |