STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_0995Hypothetical protein. (49 aa)    
Predicted Functional Partners:
Igag_0994
Hypothetical protein.
       0.655
Igag_0993
Formate dehydrogenase subunit FdhD; COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: mja:MJ0295 formate dehydrogenase (FdhD); PFAM: formate dehydrogenase subunit FdhD; SPTR: Q57743 Protein fdhD homolog; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD.
       0.510
Igag_0996
Pyridoxal-5'-phosphate-dependent protein beta subunit; COGs: COG0498 Threonine synthase; InterPro IPR001926; KEGG: mhu:Mhun_1619 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Q2FRF7 L-threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme.
       0.462
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.