STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_1124Transcriptional regulator, AsnC family; InterPro IPR019887; KEGG: sai:Saci_0731 hypothetical protein; PFAM: Transcription regulator, AsnC-type-like; SPTR: Q4JAS0 Conserved Archaeal protein; PFAM: AsnC family. (77 aa)    
Predicted Functional Partners:
Igag_1122
COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: sto:ST0669 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Q974I9 226aa long hypothetical glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family.
     
 0.574
Igag_1123
Hypothetical protein.
       0.547
Igag_1125
Hypothetical protein.
       0.536
Igag_0341
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485:IPR019887:IPR019888:IPR002345; KEGG: smr:Smar_0048 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: A3DKK1 Transcriptional regulator, AsnC family; PFAM: HTH domain; AsnC family.
    
   0.481
Igag_1126
Hypothetical protein; KEGG: abu:Abu_2304 putative succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
     
 0.481
Igag_1588
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485:IPR019887:IPR019888; KEGG: sto:ST1473 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Q970Y0 158aa long hypothetical transcriptional regulator; PFAM: AsnC family.
    
   0.481
Igag_1756
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485:IPR019887:IPR019888; KEGG: sto:ST0193 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Q976J7 HTH-type transcriptional regulator lysM; PFAM: HTH domain; AsnC family.
    
   0.481
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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