STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_1838KEGG: smr:Smar_0139 hypothetical protein; SPTR: A3DKU2 Putative uncharacterized protein. (245 aa)    
Predicted Functional Partners:
Igag_1839
COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000438:IPR000022:IPR011762:IPR011763; KEGG: tpe:Tpen_0156 carboxyl transferase; PFAM: carboxyl transferase; SPTR: A1RWI6 Carboxyl transferase; PFAM: Carboxyl transferase domain.
       0.773
Igag_1840
Biotin/lipoyl attachment domain-containing protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089; KEGG: ton:TON_0039 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: A7A9G2 Putative uncharacterized protein; PFAM: Biotin-requiring enzyme.
       0.515
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.