STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_1885Type II secretion system F domain; InterPro IPR018076; KEGG: sso:SSO2679 hypothetical protein; PFAM: Type II secretion system F domain; SPTR: Q97VE7 Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain. (582 aa)    
Predicted Functional Partners:
Igag_1884
Hypothetical protein; InterPro IPR013373; KEGG: dka:DKAM_0264 hypothetical protein; TIGRFAM: archaeal flagellin N-terminal-like domain.
     
 0.735
Igag_1883
Hypothetical protein.
       0.631
Igag_1882
Hypothetical protein.
       0.627
Igag_0123
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482; KEGG: sto:ST1397 virB11 protein; PFAM: type II secretion system protein E; SPTR: Q971F6 474aa long hypothetical virB11 protein; PFAM: Type II/IV secretion system protein.
  
  
 0.441
Igag_1645
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482; KEGG: ape:APE_1896.1 flagellar protein I-like protein; PFAM: type II secretion system protein E; SPTR: Q9YAP7 Archaeal flagellar protein I homolog; PFAM: Type II/IV secretion system protein.
  
  
 0.441
Igag_1662
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482:IPR003593; KEGG: hbu:Hbut_0213 TypeII/TypeIV secretory system protein, ATPase; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A2BJC4 TypeII/TypeIV secretory system protein, ATPase; PFAM: Type II/IV secretion system protein.
  
  
 0.441
Igag_1680
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482; KEGG: hbu:Hbut_1099 type II/IV secretion system protein; PFAM: type II secretion system protein E; SPTR: A2BLT1 Predicted Type II/IV secretion system protein; PFAM: Type II/IV secretion system protein.
  
  
 0.441
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.