STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_1890Cell wall biosynthesis glycosyltransferase-like protein; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: tpe:Tpen_1826 cell wall biosynthesis glycosyltransferase-like protein; SPTR: A1S191 Glycosyltransferases probably involved in cell wall biogenesis-like protein. (457 aa)    
Predicted Functional Partners:
Igag_1850
Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011579:IPR000595; KEGG: tga:TGAM_1748 regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; PFAM: regulatory protein ArsR; ATPase; SPTR: C5A1I1 Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; PFAM: Bacterial regulatory protein, arsR family; Archaeal ATPase.
  
 
 0.836
Igag_1889
Small GTP-binding protein; COGs: COG1084 GTPase; InterPro IPR006073:IPR002917:IPR005225; KEGG: iho:Igni_1047 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: A8ABC3 Small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
    0.803
Igag_1929
Dolichyl-phosphate beta-D-mannosyltransferase; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR007267:IPR001173; KEGG: kcr:Kcr_0200 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; GtrA family protein; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: B1L3D1 Glycosyl transferase family 2; PFAM: GtrA-like protein; Glycosyl transferase family 2.
  
 
 0.691
Igag_0487
CDP-alcohol phosphatidyltransferase; COGs: COG1213 sugar nucleotidyltransferase; InterPro IPR000462; KEGG: kcr:Kcr_0184 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: B1L3B5 CDP-alcohol phosphatidyltransferase; PFAM: Nucleotidyl transferase; CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.563
Igag_1595
KEGG: mba:Mbar_A1140 hypothetical protein; SPTR: B3T5S3 Putative Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.
  
  
 0.562
Igag_1762
Hypothetical protein.
  
  
 0.562
aroD
3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
 
   
 0.525
Igag_1217
InterPro IPR014026; KEGG: tpe:Tpen_1215 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerisation; SPTR: A1RZI3 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain.
 
     0.514
Igag_0479
Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: smr:Smar_1510 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A3DPN9 Radical SAM domain protein; PFAM: Radical SAM superfamily.
 
   
 0.487
Igag_0366
KEGG: tpe:Tpen_1507 hypothetical protein; SPTR: A1S0C4 Putative uncharacterized protein.
  
     0.453
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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