STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igag_1913NADH dehydrogenase (ubiquinone) 30 kDa subunit; COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268; KEGG: dka:DKAM_0418 NADH dehydrogenase (ubiquinone), 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: B8D3R3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit. (150 aa)    
Predicted Functional Partners:
Igag_1902
COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR001694:IPR018086; KEGG: smr:Smar_0030 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: A3DKI3 Respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH dehydrogenase.
 
 0.999
Igag_1911
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR001450:IPR017900; KEGG: dka:DKAM_0416 NADH-ubiquinone oxidoreductase, subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8D3R1 NADH-ubiquinone oxidoreductase, subunit I.
 
 0.999
Igag_1912
NADH-ubiquinone oxidoreductase chain 49kDa; COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001135:IPR018194; KEGG: smr:Smar_0020 NADH-ubiquinone oxidoreductase, chain 49kDa; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; SPTR: A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase.
 
 
 0.933
Igag_1909
Monovalent cation/proton antiporter, MnhG/PhaG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: smr:Smar_1066 monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: A3DNF4 Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
   0.930
Igag_1905
Cation antiporter; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: smr:Smar_0027 membrane bound protein complex subunit MbxA; PFAM: cation antiporter; SPTR: A3DKI0 Membrane bound protein complex subunit mbxA; PFAM: Na+/H+ ion antiporter subunit.
   
 
 0.920
Igag_1908
KEGG: dka:DKAM_0413 hypothetical protein; SPTR: B8D3Q8 Putative uncharacterized protein.
   
   0.920
Igag_1910
InterPro IPR007208; KEGG: smr:Smar_0022 multiple resistance and pH regulation protein F; PFAM: multiple resistance and pH regulation protein F; SPTR: A3DKH5 Multiple resistance and pH regulation protein F; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF).
   
   0.920
Igag_1904
NADH/Ubiquinone/plastoquinone (complex I); COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR003916:IPR001750; KEGG: smr:Smar_1071 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A3DNF9 Membrane bound hydrogenase subunit mbhH; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
   
 
 0.912
Igag_1906
NADH-ubiquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: dka:DKAM_0411 NADH-ubiquinone oxidoreductase, chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: B8D3Q6 NADH-ubiquinone oxidoreductase, chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
   
   0.907
Igag_1907
InterPro IPR007182; KEGG: smr:Smar_0025 Na+/H+ antiporter MnhB subunit-related protein; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: A3DKH8 Na+/H+ antiporter MnhB subunit-related protein; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter.
   
   0.907
Your Current Organism:
Ignisphaera aggregans
NCBI taxonomy Id: 583356
Other names: I. aggregans DSM 17230, Ignisphaera aggregans DSM 17230, Ignisphaera aggregans str. DSM 17230, Ignisphaera aggregans strain DSM 17230
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