| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADH59791.1 | ADH59792.1 | Tmath_0002 | Tmath_0003 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: tpd:Teth39_0003 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4 domain protein. | 0.904 |
| ADH59791.1 | ADH61214.1 | Tmath_0002 | Tmath_1503 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | 0.554 |
| ADH59791.1 | ADH61922.1 | Tmath_0002 | Tmath_2259 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.849 |
| ADH59791.1 | dnaA | Tmath_0002 | Tmath_0001 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.994 |
| ADH59791.1 | polA | Tmath_0002 | Tmath_0850 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.994 |
| ADH59791.1 | recF | Tmath_0002 | Tmath_0004 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.955 |
| ADH59791.1 | rnpA | Tmath_0002 | Tmath_2286 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.648 |
| ADH59791.1 | rplB | Tmath_0002 | Tmath_1930 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.535 |
| ADH59792.1 | ADH59791.1 | Tmath_0003 | Tmath_0002 | TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: tpd:Teth39_0003 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4 domain protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.904 |
| ADH59792.1 | dnaA | Tmath_0003 | Tmath_0001 | TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: tpd:Teth39_0003 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4 domain protein. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.657 |
| ADH59792.1 | recF | Tmath_0003 | Tmath_0004 | TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: tpd:Teth39_0003 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4 domain protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.948 |
| ADH61214.1 | ADH59791.1 | Tmath_1503 | Tmath_0002 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.554 |
| ADH61214.1 | ADH61733.1 | Tmath_1503 | Tmath_2059 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.802 |
| ADH61214.1 | ADH61922.1 | Tmath_1503 | Tmath_2259 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.969 |
| ADH61214.1 | ADH61938.1 | Tmath_1503 | Tmath_2276 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | PFAM: Cobyrinic acid ac-diamide synthase; KEGG: tex:Teth514_2404 cobyrinic acid a,c-diamide synthase. | 0.457 |
| ADH61214.1 | dnaA | Tmath_1503 | Tmath_0001 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.624 |
| ADH61214.1 | polA | Tmath_1503 | Tmath_0850 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.737 |
| ADH61214.1 | rplB | Tmath_1503 | Tmath_1930 | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.462 |
| ADH61733.1 | ADH61214.1 | Tmath_2059 | Tmath_1503 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Regulatory protein DeoR; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. | 0.802 |
| ADH61733.1 | ADH61922.1 | Tmath_2059 | Tmath_2259 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.864 |
