Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH59863.1KEGG: tpd:Teth39_0051 hypothetical protein. (397 aa)    
Predicted Functional Partners:
ADH59864.1
PFAM: TRAG family protein; KEGG: tpd:Teth39_0052 TraG family protein.
 
     0.955
ADH59858.1
PFAM: StbA family protein; KEGG: tpd:Teth39_0044 StbA family protein.
 
 
 0.924
ADH59866.1
KEGG: tpd:Teth39_0054 hypothetical protein.
 
     0.915
ADH59868.1
KEGG: tpd:Teth39_0059 hypothetical protein.
 
     0.911
ADH59869.1
KEGG: tpd:Teth39_0060 type IV secretory pathway VirB4 components-like protein.
 
     0.908
ADH60927.1
TIGRFAM: stage V sporulation protein K; PFAM: AAA ATPase central domain protein; KEGG: tex:Teth514_1619 ATPase central domain-containing protein; SMART: AAA ATPase.
   
 0.838
ADH61003.1
KEGG: tpd:Teth39_1259 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.836
ADH59862.1
KEGG: tpd:Teth39_0050 hypothetical protein.
       0.799
hisS
TIGRFAM: histidyl-tRNA synthetase; KEGG: tpd:Teth39_1035 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
    
  0.789
ADH59865.1
KEGG: tpd:Teth39_0053 hypothetical protein.
       0.765
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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