Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADH59912.1KEGG: tpd:Teth39_2166 putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase. (519 aa)    
Predicted Functional Partners:
ADH61273.1
KEGG: tpd:Teth39_0729 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor.
 
   
 0.811
ADH59911.1
PFAM: protein of unknown function DUF917; KEGG: tpd:Teth39_2167 hypothetical protein.
       0.792
ADH59910.1
KEGG: tpd:Teth39_2168 hypothetical protein.
       0.787
ADH61766.1
TIGRFAM: PAS sensor protein; PFAM: hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; PAS fold domain protein; KEGG: tte:TTE0697 ferredoxin 2; SMART: PAS domain containing protein.
 
      0.688
ADH61512.1
KEGG: csc:Csac_1330 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
   
 0.550
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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