Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60016.1Hypothetical protein; KEGG: rxy:Rxyl_0401 xylose isomerase-like TIM barrel. (48 aa)    
Predicted Functional Partners:
xylA
TIGRFAM: xylose isomerase; KEGG: tex:Teth514_0153 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
     
 0.701
xylB
Xylulokinase; KEGG: tex:Teth514_0154 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
     
 0.690
ADH60019.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gym:GYMC10_3207 oxidoreductase domain protein.
       0.625
ADH60020.1
PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: pjd:Pjdr2_5203 oxidoreductase domain protein.
       0.508
uxaC
KEGG: tte:TTE1939 glucuronate isomerase; PFAM: Glucuronate isomerase.
       0.466
ADH60015.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: tpd:Teth39_2061 TrkA domain-containing protein.
       0.465
ADH60014.1
TIGRFAM: potassium uptake protein, TrkH family; KEGG: tpd:Teth39_2062 TrkH family potassium uptake protein; PFAM: cation transporter.
       0.446
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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