Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60177.1PFAM: TatD-related deoxyribonuclease; KEGG: csc:Csac_1647 TatD-related deoxyribonuclease. (253 aa)    
Predicted Functional Partners:
ADH60178.1
PFAM: Protein of unknown function DUF2250; KEGG: csc:Csac_1648 hypothetical protein.
       0.544
ADH59800.1
KEGG: chy:CHY_1679 prophage LambdaCh01, portal protein.
  
     0.454
ADH61828.1
KEGG: tte:TTE2583 hypothetical protein.
  
     0.425
ADH60176.1
Sulfite reductase, subunit C; KEGG: tpd:Teth39_1915 nitrite and sulphite reductase 4Fe-4S region; TIGRFAM: sulfite reductase, subunit C; PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
       0.407
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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