Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADH60247.1PFAM: ABC-2 type transporter; KEGG: fno:Fnod_1602 ABC-2 type transporter. (273 aa)    
Predicted Functional Partners:
ADH60245.1
KEGG: pho:PH1849 ATP-binding transport protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.912
ADH60248.1
PFAM: nitroreductase; KEGG: mbn:Mboo_1660 nitroreductase.
  
    0.875
ADH60246.1
PFAM: ABC-2 type transporter; KEGG: llk:LLKF_1878 ABC-2 type transporter, permease protein.
 
    
0.813
ADH60249.1
Hypothetical protein.
       0.773
ADH61461.1
KEGG: tpd:Teth39_0561 ABC transporter related; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase.
     
 0.762
ADH60168.1
PFAM: ABC-3 protein; KEGG: tex:Teth514_0276 ABC-3 protein.
    
  0.761
ADH60053.1
KEGG: bcl:ABC3122 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
     
 0.758
ADH60213.1
KEGG: tpd:Teth39_1884 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
     
  0.757
ADH60242.1
PFAM: ABC-2 type transporter; KEGG: tro:trd_A0466 putative integral membrane protein.
     
  0.757
ADH60332.1
KEGG: tpd:Teth39_1764 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
     
  0.757
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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