Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60248.1PFAM: nitroreductase; KEGG: mbn:Mboo_1660 nitroreductase. (164 aa)    
Predicted Functional Partners:
ADH60246.1
PFAM: ABC-2 type transporter; KEGG: llk:LLKF_1878 ABC-2 type transporter, permease protein.
  
    0.875
ADH60247.1
PFAM: ABC-2 type transporter; KEGG: fno:Fnod_1602 ABC-2 type transporter.
  
    0.875
ADH60245.1
KEGG: pho:PH1849 ATP-binding transport protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.810
ADH60249.1
Hypothetical protein.
       0.773
ADH61442.1
PFAM: AMP-dependent synthetase and ligase; KEGG: tpd:Teth39_0579 AMP-dependent synthetase and ligase.
   
   0.685
ADH60243.1
PFAM: protein of unknown function DUF181; KEGG: sai:Saci_0526 hypothetical protein.
  
  
 0.602
ADH60250.1
Transcriptional regulator, LuxR family; KEGG: tex:Teth514_0348 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
     
 0.559
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.557
ADH60242.1
PFAM: ABC-2 type transporter; KEGG: tro:trd_A0466 putative integral membrane protein.
  
    0.476
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.464
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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