Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADH60313.1KEGG: tpd:Teth39_1787 hypothetical protein. (138 aa)    
Predicted Functional Partners:
ADH60315.1
PFAM: FlgN family protein; KEGG: tpd:Teth39_1785 hypothetical protein.
 
  
 0.987
ADH60314.1
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: tpd:Teth39_1786 hypothetical protein.
  
 
 0.975
ADH61295.1
KEGG: tpd:Teth39_0701 hypothetical protein.
   
 0.957
ADH60927.1
TIGRFAM: stage V sporulation protein K; PFAM: AAA ATPase central domain protein; KEGG: tex:Teth514_1619 ATPase central domain-containing protein; SMART: AAA ATPase.
  
 0.953
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.952
ADH61842.1
KEGG: ckr:CKR_2585 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein.
    
 0.949
ADH61015.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 0.948
gpmI
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.934
ADH60954.1
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tpd:Teth39_1210 ribosomal protein L7Ae/L30e/S12e/Gadd45.
   
  0.927
ADH60318.1
KEGG: tex:Teth514_0453 hypothetical protein.
 
  
 0.914
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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