STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH60394.1Stage V sporulation protein B; KEGG: tpd:Teth39_1704 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein. (518 aa)    
Predicted Functional Partners:
ADH60395.1
KEGG: tpd:Teth39_1703 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB.
       0.566
ADH61525.1
KEGG: tte:TTE2165 hypothetical protein.
  
     0.563
ADH60815.1
PFAM: protein of unknown function DUF965; KEGG: tpd:Teth39_1053 hypothetical protein; Belongs to the UPF0297 family.
  
     0.560
ADH61022.1
Putative helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.534
ADH61730.1
KEGG: tpd:Teth39_0252 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
 
  
 0.520
ADH61262.1
PFAM: protein of unknown function DUF633; KEGG: tex:Teth514_1316 hypothetical protein.
  
     0.518
ADH61623.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: tpd:Teth39_0357 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
  
    0.506
ADH60393.1
TIGRFAM: amidohydrolase; KEGG: tpd:Teth39_1705 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
    0.490
ADH61930.1
PFAM: protein of unknown function DUF951; KEGG: tpd:Teth39_2276 hypothetical protein.
  
     0.484
ADH61686.1
PFAM: GerA spore germination protein; KEGG: tpd:Teth39_0311 GerA spore germination protein.
  
   
 0.475
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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