Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
ADH60407.1N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; KEGG: amt:Amet_1886 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin. (477 aa)    
Predicted Functional Partners:
ADH61575.1
N-acetylmuramoyl-L-alanine amidase CwlD; SMART: cell wall hydrolase/autolysin; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; KEGG: tpd:Teth39_0447 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin.
  
  
 
0.916
ADH61708.1
KEGG: tpd:Teth39_0284 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
  
 
0.914
ADH60785.1
KEGG: aoe:Clos_1724 SpoIID/LytB domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein.
 
    0.522
ADH60406.1
KEGG: tpd:Teth39_1684 hypothetical protein.
       0.507
ADH60057.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tte:TTE0215 beta-glucosidase-related glycosidase.
    
  0.504
ADH60410.1
Phosphodiesterase, MJ0936 family; KEGG: tpd:Teth39_1681 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase.
  
    0.504
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
       0.496
ADH60409.1
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.496
ADH61530.1
KEGG: tpd:Teth39_0486 outer membrane lipoprotein-sorting protein-like protein.
  
 
   0.488
ADH61457.1
PFAM: Peptidase M23; KEGG: tpd:Teth39_0565 peptidase M23B.
 
   0.487
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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