Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH60477.1PFAM: protein of unknown function DUF952; KEGG: rci:RRC138 hypothetical protein. (118 aa)    
Predicted Functional Partners:
ADH60476.1
Phosphodiesterase, MJ0936 family; KEGG: tpd:Teth39_1616 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase.
       0.615
ADH60478.1
PFAM: natural resistance-associated macrophage protein; KEGG: tte:TTE0686 manganese transporter NRAMP.
       0.508
ADH61095.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: tpd:Teth39_1339 peptidoglycan binding domain-containing protein.
  
     0.407
ADH60479.1
PFAM: DNA polymerase beta domain protein region; KEGG: tpd:Teth39_1612 DNA polymerase beta subunit.
       0.402
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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