Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60492.1KEGG: hor:Hore_15140 CRISPR-associated protein, Cmr3 family; TIGRFAM: CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein, Cmr3. (356 aa)    
Predicted Functional Partners:
ADH60491.1
TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: hor:Hore_15150 CRISPR-associated protein, Crm2 family.
 
 
 
 0.992
ADH60488.1
KEGG: cts:Ctha_0944 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.972
ADH60486.1
KEGG: tpd:Teth39_1602 CRISPR-associated RAMP Cmr1 family protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: DNA polymerase beta domain protein region; protein of unknown function DUF324.
 
 
   0.959
ADH60489.1
KEGG: hor:Hore_15120 CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1.
 
 
 
 0.939
ADH60490.1
KEGG: cts:Ctha_0942 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.939
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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