Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADH60568.1KEGG: tex:Teth514_2169 hypothetical protein. (158 aa)    
Predicted Functional Partners:
ADH60548.1
KEGG: tpd:Teth39_1507 Mur ligase middle domain-containing protein.
  
     0.592
ADH60841.1
KEGG: tpd:Teth39_1079 hypothetical protein.
  
     0.572
ADH60567.1
Hypothetical protein.
       0.518
ADH60296.1
KEGG: tpd:Teth39_1800 hypothetical protein.
  
     0.508
ADH60302.1
PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; KEGG: tpd:Teth39_1794 hypothetical protein.
 
     0.501
ADH61207.1
KEGG: tex:Teth514_2039 hypothetical protein.
  
     0.466
ADH61702.1
KEGG: tpd:Teth39_0292 hypothetical protein.
  
     0.460
ADH60363.1
Manually curated; PFAM: Accessory gene regulator B; KEGG: tpd:Teth39_1733 accessory gene regulator B; SMART: Accessory gene regulator B.
 
     0.456
ADH60711.1
KEGG: tpd:Teth39_0937 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.438
ADH60228.1
PFAM: major facilitator superfamily MFS_1; KEGG: tte:TTE0395 major facilitator superfamily permease.
  
     0.406
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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