Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADH60575.1KEGG: ate:Athe_0674 hypothetical protein. (280 aa)    
Predicted Functional Partners:
ADH60578.1
KEGG: ate:Athe_0677 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.842
ADH60576.1
KEGG: ate:Athe_0675 hypothetical protein.
       0.773
ADH60486.1
KEGG: tpd:Teth39_1602 CRISPR-associated RAMP Cmr1 family protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: DNA polymerase beta domain protein region; protein of unknown function DUF324.
  
     0.745
ADH60721.1
PFAM: protein of unknown function DUF990; KEGG: tte:TTE2236 hypothetical protein.
  
     0.725
ADH60577.1
KEGG: ate:Athe_0676 hypothetical protein.
       0.686
ADH60579.1
KEGG: ate:Athe_0678 hypothetical protein.
       0.657
ADH60720.1
PFAM: protein of unknown function DUF990; KEGG: tte:TTE2238 ABC-type multidrug transport system, permease component.
  
     0.624
ADH61671.1
Transcriptional regulator, XRE family; KEGG: tte:TTE2364 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.614
ADH60028.1
PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0558 sugar ABC transporter substrate-binding protein.
  
     0.555
ADH60719.1
ABC transporter related protein; KEGG: tte:TTE2239 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.466
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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