Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH60578.1KEGG: ate:Athe_0677 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (218 aa)    
Predicted Functional Partners:
ADH60575.1
KEGG: ate:Athe_0674 hypothetical protein.
 
     0.842
ADH60579.1
KEGG: ate:Athe_0678 hypothetical protein.
       0.778
ADH60169.1
KEGG: tpd:Teth39_1925 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
  0.761
ADH60577.1
KEGG: ate:Athe_0676 hypothetical protein.
       0.702
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     
  0.665
xylG
ABC transporter related protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
     
  0.665
ADH60242.1
PFAM: ABC-2 type transporter; KEGG: tro:trd_A0466 putative integral membrane protein.
  
 
 0.572
ADH60246.1
PFAM: ABC-2 type transporter; KEGG: llk:LLKF_1878 ABC-2 type transporter, permease protein.
  
 
 0.572
ADH60247.1
PFAM: ABC-2 type transporter; KEGG: fno:Fnod_1602 ABC-2 type transporter.
  
 
 0.572
ADH60576.1
KEGG: ate:Athe_0675 hypothetical protein.
       0.524
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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