STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH60581.1KEGG: tpd:Teth39_1477 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II. (307 aa)    
Predicted Functional Partners:
ADH61483.1
Delta-lactam-biosynthetic de-N-acetylase; KEGG: tpd:Teth39_0532 polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase.
 
    
 0.900
ADH60946.1
PFAM: polysaccharide deacetylase; KEGG: tpd:Teth39_1202 polysaccharide deacetylase.
 
    
 0.877
ADH60904.1
TIGRFAM: spore coat assembly protein SafA; PFAM: Peptidoglycan-binding lysin domain; KEGG: tte:TTE1337 LysM repeat-containing protein; SMART: Peptidoglycan-binding LysM.
 
      0.820
ADH60580.1
PFAM: Propeptide PepSY amd peptidase M4; S-layer domain protein; KEGG: tte:TTE0861 hypothetical protein.
 
     0.634
ADH60582.1
KEGG: tpd:Teth39_1476 hypothetical protein.
       0.543
ADH60583.1
PFAM: PspC domain protein; KEGG: tpd:Teth39_1475 phage shock protein C, PspC.
       0.473
ADH60643.1
KEGG: tte:TTE0927 hypothetical protein.
  
     0.440
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.