Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ADH60583.1PFAM: PspC domain protein; KEGG: tpd:Teth39_1475 phage shock protein C, PspC. (138 aa)    
Predicted Functional Partners:
ADH61207.1
KEGG: tex:Teth514_2039 hypothetical protein.
  
 
 0.900
ADH60582.1
KEGG: tpd:Teth39_1476 hypothetical protein.
       0.669
ADH60661.1
PFAM: membrane protein of unknown function; KEGG: tpd:Teth39_1403 hypothetical protein.
  
    0.635
ADH60581.1
KEGG: tpd:Teth39_1477 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II.
       0.473
ADH61814.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: tex:Teth514_0590 2-alkenal reductase; SMART: PDZ/DHR/GLGF domain protein.
  
  
 0.449
ADH61882.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: tex:Teth514_2342 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein.
  
  
 0.449
ADH61455.1
KEGG: tpd:Teth39_0567 PDZ/DHR/GLGF domain-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein.
  
  
 0.426
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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