Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60612.1TIGRFAM: penicillin-binding protein 2; KEGG: tpd:Teth39_1449 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. (766 aa)    
Predicted Functional Partners:
ADH60610.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.982
ADH60609.1
KEGG: tpd:Teth39_1452 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl.
 
 
 
 0.970
ADH60128.1
Penicillin-binding protein, 1A family; KEGG: tte:TTE0314 membrane carboxypeptidase (penicillin-binding protein); TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
 
0.961
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 0.960
ADH60882.1
KEGG: tpd:Teth39_1119 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.
 
 
 0.954
ADH61385.1
KEGG: tpd:Teth39_0623 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
  
  
0.946
ADH60825.1
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: tpd:Teth39_1063 peptidoglycan glycosyltransferase.
  
  
0.933
ADH61449.1
KEGG: tpd:Teth39_0573 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase.
  
  
0.928
ADH60641.1
KEGG: tpd:Teth39_1422 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.
 
 
 0.924
ADH61190.1
Stage V sporulation protein D; SMART: PASTA domain containing protein; manually curated; TIGRFAM: stage V sporulation protein D; KEGG: tpd:Teth39_0807 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein.
 
  
0.922
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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