Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADH60627.1KEGG: tex:Teth514_2118 hypothetical protein. (123 aa)    
Predicted Functional Partners:
ADH60626.1
PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2708 hypothetical protein.
 
    0.667
ADH60629.1
PFAM: protein of unknown function DUF464; KEGG: tpd:Teth39_1434 hypothetical protein.
 
     0.561
ADH60625.1
PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2708 hypothetical protein.
  
    0.548
ADH59946.1
PFAM: S-layer domain protein; KEGG: tte:TTE0116 S-layer-like domain-containing protein.
  
     0.545
ADH60634.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tpd:Teth39_1428 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
   
    0.542
ADH61925.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: tpd:Teth39_2271 hypothetical protein.
  
     0.521
rpmA
Ribosomal protein L27; KEGG: tpd:Teth39_1433 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.505
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.504
ADH59947.1
KEGG: tpd:Teth39_2130 hypothetical protein.
  
     0.448
obg
GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.411
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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