Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADH60659.1KEGG: tte:TTE0160 hypothetical protein. (112 aa)    
Predicted Functional Partners:
ADH60658.1
KEGG: hor:Hore_11130 oligopeptide transporter, OPT family; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein.
 
     0.932
ADH60660.1
KEGG: sat:SYN_00862 putative cytoplasmic protein.
       0.693
ADH61258.1
Dipeptidase; KEGG: tpd:Teth39_0750 dipeptidase PepV; TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein.
 
     0.430
ADH60661.1
PFAM: membrane protein of unknown function; KEGG: tpd:Teth39_1403 hypothetical protein.
       0.408
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
       0.408
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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