Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60688.1PFAM: glycosyl transferase family 39; KEGG: tex:Teth514_1332 glycosyl transferase family protein. (717 aa)    
Predicted Functional Partners:
ADH60687.1
PFAM: GtrA family protein; KEGG: tex:Teth514_1331 GtrA family protein.
 
  
 0.913
ADH60686.1
PFAM: glycosyl transferase family 2; KEGG: ckr:CKR_0580 hypothetical protein.
 
  
 0.882
ADH60684.1
KEGG: ckr:CKR_0588 hypothetical protein.
 
     0.797
ADH60685.1
KEGG: tpd:Teth39_0974 hypothetical protein.
       0.602
ADH60683.1
KEGG: ckr:CKR_2971 hypothetical protein; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
     
 0.469
ADH60689.1
TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; deoxyribonuclease/rho motif-related TRAM; KEGG: tex:Teth514_1333 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB.
  
    0.463
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.410
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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