Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60690.1PFAM: histidine triad (HIT) protein; KEGG: tpd:Teth39_1375 histidine triad (HIT) protein. (114 aa)    
Predicted Functional Partners:
ADH60559.1
TIGRFAM: glutamine synthetase, type I; KEGG: tpd:Teth39_1496 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
  
   0.786
ADH60689.1
TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; deoxyribonuclease/rho motif-related TRAM; KEGG: tex:Teth514_1333 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB.
  
   0.785
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
 
  0.774
ADH61284.1
KEGG: tpd:Teth39_0715 phosphoribulokinase/uridine kinase; PFAM: phosphoribulokinase/uridine kinase; SMART: AAA ATPase.
   
 0.754
rpsU
Ribosomal protein S21; KEGG: tpd:Teth39_1374 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.687
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
 
   0.638
ADH60692.1
PFAM: Protein of unknown function; KEGG: tpd:Teth39_1373 GatB/YqeY domain-containing protein.
     
 0.636
lysS
KEGG: tpd:Teth39_0318 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 
 0.606
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
   
   0.537
ADH60693.1
Sporulation protein YqfC; KEGG: tpd:Teth39_1371 hypothetical protein; TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429.
       0.516
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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