Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH60827.1KEGG: tpd:Teth39_1065 HAD family phosphatase; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase. (166 aa)    
Predicted Functional Partners:
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
    0.871
ADH60826.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.700
ADH60829.1
KEGG: tpd:Teth39_1067 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
       0.661
ADH60830.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: tex:Teth514_1505 twitching motility protein; SMART: AAA ATPase.
       0.648
ADH60831.1
PFAM: Type II secretion system F domain; KEGG: tpd:Teth39_1069 type II secretion system protein.
       0.644
ADH60832.1
KEGG: tpd:Teth39_1070 Tfp pilus assembly protein PilE-like protein.
       0.578
ADH60838.1
PFAM: Late competence development protein ComFB; KEGG: tpd:Teth39_1076 hypothetical protein.
 
     0.575
ADH60634.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tpd:Teth39_1428 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.562
ADH60847.1
PFAM: peptidase M24; creatinase; KEGG: tpd:Teth39_1085 peptidase M24; Belongs to the peptidase M24B family.
 
     0.558
ADH60833.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.528
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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