Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnyMetal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. (508 aa)    
Predicted Functional Partners:
ADH59931.1
PFAM: PSP1 domain protein; KEGG: tpd:Teth39_2146 PSP1 domain-containing protein.
 
  
 0.889
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.820
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
  
 0.800
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.758
ADH60932.1
PFAM: metallophosphoesterase; KEGG: tpd:Teth39_1187 metallophosphoesterase.
  
  
 0.750
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.726
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
     
 0.705
queA
S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
   
 0.702
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: tex:Teth514_2049 phenylalanyl-tRNA synthetase subunit beta.
  
  
 0.686
rpmI
KEGG: tex:Teth514_2053 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
     
 0.683
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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