Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH61064.1PFAM: protein of unknown function DUF322; KEGG: tpd:Teth39_1307 hypothetical protein. (116 aa)    
Predicted Functional Partners:
ADH61063.1
DAK2 domain fusion protein YloV; KEGG: tpd:Teth39_1306 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase.
 
  
 0.993
ADH61061.1
KEGG: tex:Teth514_1740 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
 
    0.876
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.832
rpmB
Ribosomal protein L28; KEGG: tex:Teth514_1744 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.642
ADH60815.1
PFAM: protein of unknown function DUF965; KEGG: tpd:Teth39_1053 hypothetical protein; Belongs to the UPF0297 family.
  
    0.607
ADH61060.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: tpd:Teth39_1303 small acid-soluble spore protein, alpha/beta type.
  
    0.503
ADH61056.1
KEGG: tpd:Teth39_1299 hypothetical protein.
 
     0.494
ADH61022.1
Putative helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
   
 0.461
ADH61930.1
PFAM: protein of unknown function DUF951; KEGG: tpd:Teth39_2276 hypothetical protein.
  
     0.459
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
  
    0.454
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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